Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
PRAD rs10176226 chr2:178798249 A/G 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10176232 chr2:178798272 A/G 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10180071 chr2:178784980 T/A 4.15E-5 493 30.78 31.93 20.48 KM Plot
PRAD rs10181377 chr2:178782261 A/G 4.15E-5 493 30.78 31.93 20.48 KM Plot
PRAD rs10182833 chr2:178792763 G/A 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10183144 chr2:178793231 C/A 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10186239 chr2:178793916 C/G 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10190066 chr2:178787804 T/C 4.16E-5 492 30.8 31.93 20.48 KM Plot
PRAD rs10190154 chr2:178787890 T/G 4.15E-5 493 30.78 31.93 20.48 KM Plot
PRAD rs10190805 chr2:178784586 A/G 4.16E-5 493 30.8 31.93 20.48 KM Plot
PRAD rs10191328 chr2:178785158 A/G 4.15E-5 493 30.78 31.93 20.48 KM Plot
PRAD rs10192990 chr2:178795840 G/A 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10193299 chr2:178796105 G/A 4.13E-5 494 30.77 31.93 20.48 KM Plot
PRAD rs10194612 chr2:178786087 A/G 4.15E-5 493 30.78 31.93 20.48 KM Plot
PRAD rs10195497 chr2:178792993 T/C 4.13E-5 494 30.77 31.93 20.48 KM Plot